Miyakogusa Predicted Gene

Lj1g3v0948570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7M7B1_SOYBN 1168 85.4 89.3 (tr|K7M7B1) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G53170.1 1085 79.7 89.1 | Symbols: FTSH11 | FTSH protease 11 | chr5:21563023-21567922 REVERSE LENGTH=806
Medicago Medtr1g028390.1 1158 84.1 89.3 | ATP-dependent zinc metalloprotease FTSH protein | HC | chr1:9573739-9564094 | 20130731
Soybean Glyma06g13140.1 1070 78.1 84.9  
LJGI gnl|LJGI|TC59016 1187 100.0 100.0 similar to UniRef100_Q6A167 Cluster: Ftsh-like protease; n=1; Pisum sativum|Rep: Ftsh-like protease - Pisum sativum (Garden pea), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0948570.1 length: 797 aa.
IPR000642 Peptidase M41
method AccNumber shortName E-value location
Molecular Function GO:0004222 metalloendopeptidase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006508 proteolysis    
HMMPfam PF01434 Peptidase_M41 3.6e-70 577-772
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.8e-23 383-518
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.8e-40 387-515
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 486-504
IPR005936 Peptidase, FtsH
Molecular Function GO:0004222 metalloendopeptidase activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0030163 protein catabolic process    
HAMAP MF_01458 FtsH 31.722 8-790
HMMTigr TIGR01241 FtsH_fam: 2.6e-179 323-773
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.5e-68 340-588
no_ID  
Coil coil coiled-coil NA 730-765
Gene3D G3DSA:1.10.8.60 no description 2.5e-24 527-600
Gene3D G3DSA:3.40.50.300 no description 8.2e-56 347-526
HMMPanther PTHR23076 METALLOPROTEASE 4.6e-286 280-791
HMMPanther PTHR23076:SF10 CELL 4.6e-286 280-791
Seg seg seg NA 7-19
21-34
47-63
112-123
316-333
741-760
783-793
superfamily SSF140990 FtsH 7.7e-61 597-785
Putative transmembrane regions
  From To
TM segments
SOSUI
288 310
Wolf-PSORT
Lj1g3v0948570.1	chlo 11, cyto 1, mito 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0948570.1