Miyakogusa Predicted Gene

Lj1g3v0911990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JYZ7_SOYBN 1092 78.1 86.9 (tr|I1JYZ7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G77010.1 728 53.6 71.6 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:28942710-28944797 FORWARD LENGTH=695
Medicago Medtr8g075460.1 1091 77.6 86.7 | PPR containing plant-like protein | HC | chr8:31911388-31913406 | 20130731
Soybean Glyma04g42220.1 1092 78.1 86.9  
LJGI gnl|LJGI|FS318683 1400 99.7 99.7 weakly similar to UniRef100_A7NSP9 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0911990.1 length: 673 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00023 34-59
95-123
127-151
233-255
263-293
366-392
395-421
468-492
568-592
HMMPfam PF13041 PPR_2 1.2e-11 494-540
HMMPfam PF13812 PPR_3 0.016 64-90
HMMTigr TIGR00756 PPR: 0.00089 95-126
127-152
263-296
395-425
496-529
569-592
ProfileScan PS51375 PPR 6.095 124-158
62-96
31-61
97-123
261-295
230-260
199-229
362-396
331-361
397-427
428-462
494-528
463-493
529-559
565-595
631-665
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5e-09 624-649
no_ID  
HMMPanther PTHR24015 FAMILY 7.8e-201 16-671
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 7.8e-201 16-671
Wolf-PSORT
Lj1g3v0911990.1	cyto 8, E.R. 3, chlo 1, mito 1, vacu 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0911990.1