Miyakogusa Predicted Gene

Lj1g3v0898880.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep --No_Hits--

Medicago Medtr4g051565.1 60.8 37.8 47.8 | bHLH transcription factor-like protein | HC | chr4:18510285-18517807 | 20130731

Soybean --No_Hits--

LJGI gnl|LJGI|TC77387 77.8 88.7 88.7 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding; n=2; Medicago truncatula|Rep: Helix-loop-helix DNA-binding - Medicago truncatula (Barrel medic), partial (17%)

Putative transmembrane regions

From To

TM segments
SOSUI 28 50

55 77

Wolf-PSORT

Lj1g3v0898880.2 chlo 6, cyto 5, nucl 1, E.R. 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v0898880.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	--No_Hits--
Medicago	Medtr4g051565.1	60.8	37.8	47.8	\| bHLH transcription factor-like protein \| HC \| chr4:18510285-18517807 \| 20130731
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC77387	77.8	88.7	88.7	similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding; n=2; Medicago truncatula\|Rep: Helix-loop-helix DNA-binding - Medicago truncatula (Barrel medic), partial (17%)