Miyakogusa Predicted Gene

Lj1g3v0874200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T0K9_LOTJA 880 89.8 89.8 (tr|I3T0K9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G44110.1 533 70.6 84.2 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-16777182 REVERSE LENGTH=460
Medicago Medtr3g088415.1 675 77.5 84.2 | carboxy-terminal domain cyclin | HC | chr3:40179537-40182656 | 20130731
Soybean Glyma04g42540.1 689 78.3 83.3  
LJGI gnl|LJGI|TC79273 1449 99.6 99.6 similar to UniRef100_Q39879 Cluster: Mitotic cyclin a2-type; n=1; Glycine max|Rep: Mitotic cyclin a2-type - Glycine max (Soybean), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0874200.1 length: 507 aa.
IPR004367 Cyclin, C-terminal domain
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
HMMPfam PF02984 Cyclin_C 4.5e-31 374-493
IPR006671 Cyclin, N-terminal
HMMPfam PF00134 Cyclin_N 1.7e-45 245-372
PatternScan PS00292 CYCLINS NA 276-307
IPR013763 Cyclin-like
Gene3D G3DSA:1.10.472.10 no description 7.1e-44 262-365
366-500
HMMSmart SM00385 domain 1.7e-18 281-365
378-466
superfamily SSF47954 Cyclin-like 2.5e-36 233-372
373-502
IPR014400 Cyclin A/B/D/E
Biological Process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity    
Molecular Function GO:0019901 protein kinase binding    
Biological Process GO:0051726 regulation of cell cycle    
HMMPIR PIRSF001771 Cyclin, 3.5e-157 16-504
no_ID  
HMMPanther PTHR10177 CYCLINE 1.4e-206 133-504
HMMPanther PTHR10177:SF49 CYCLIN-A 1.4e-206 133-504
Seg seg seg NA 2-18
27-36
38-59
129-143
Putative transmembrane regions
  From To
TM segments
SOSUI		 418 440
Wolf-PSORT
Lj1g3v0874200.1	chlo 11, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0874200.1