Miyakogusa Predicted Gene

Lj1g3v0827060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KAA7_SOYBN 673 89.8 93.9 (tr|I1KAA7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G77470.1 566 76.8 85.4 | Symbols: RFC3, RFC5 | replication factor C subunit 3 | chr1:29112194-29114323 REVERSE LENGTH=369
Medicago Medtr3g088120.1 629 86.7 91.5 | replication factor C subunit 5 | HC | chr3:39964069-39957680 | 20130731
Soybean Glyma06g11980.1 673 89.8 93.9  
LJGI gnl|LJGI|TC75704 2202 99.8 99.8 similar to UniRef100_A7NVF6 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0827060.1 length: 372 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 5.7e-11 75-205
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.1e-16 79-200
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006260 DNA replication    
superfamily SSF48019 DNA 1.4e-22 267-360
IPR013748 Replication factor C, C-terminal domain
HMMPfam PF08542 Rep_fac_C 1.1e-18 266-354
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.7e-51 41-261
no_ID  
Gene3D G3DSA:1.10.8.60 no description 3.5e-23 206-269
Gene3D G3DSA:1.20.272.10 no description 3.7e-36 270-363
Gene3D G3DSA:3.40.50.300 no description 4.8e-60 44-202
HMMPanther PTHR11669 REPLICATION 1.1e-140 40-358
Wolf-PSORT
Lj1g3v0827060.1	cysk 10, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0827060.1