Miyakogusa Predicted Gene

Lj1g3v0816040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SML8_LOTJA 536 95.7 95.7 (tr|I3SML8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G21790.1 347 63.0 76.2 | Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr1:7654357-7655691 FORWARD LENGTH=288
Medicago Medtr3g088060.1 425 78.2 86.2 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain protein | HC | chr3:39922169-39919131 | 20130731
Soybean Glyma06g11910.1 417 76.9 81.7  
LJGI gnl|LJGI|TC59108 1647 100.0 100.0 similar to UniRef100_A7NVD9 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (76%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0816040.1 length: 276 aa.
IPR006634 TRAM/LAG1/CLN8 homology domain
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF03798 TRAM_LAG1_CLN8 1.1e-18 62-250
HMMSmart SM00724 TRAM, 1.5e-27 57-262
ProfileScan PS50922 TLC 15.816 57-274
no_ID  
Seg seg seg NA 246-257
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
31 53
72 93
135 157
159 179
199 221
236 258
Wolf-PSORT
Lj1g3v0816040.1	chlo 5, E.R. 4, vacu 2, E.R._plas 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0816040.1