Miyakogusa Predicted Gene

Lj1g3v0814960.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL Q2PEY2_TRIPR 1021 84.6 92.1 (tr|Q2PEY2) Putative long chain acyl-CoA synthetase 9 OS=Trifolium pratense PE=2 SV=1
TAIR_pep AT1G77590.1 892 74.2 87.9 | Symbols: LACS9 | long chain acyl-CoA synthetase 9 | chr1:29148501-29151776 REVERSE LENGTH=691
Medicago Medtr3g087980.1 988 82.0 90.2 | bacterial long-chain fatty acid CoA synthetase | HC | chr3:39878065-39887996 | 20130731
Soybean Glyma06g11860.1 1002 83.2 91.2  
LJGI gnl|LJGI|TC59562 1269 100.0 100.0 similar to UniRef100_A7NVD1 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0814960.1 length: 571 aa.
IPR000873 AMP-dependent synthetase/ligase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00501 AMP-binding 9.4e-99 107-571
IPR020845 AMP-binding, conserved site
PatternScan PS00455 AMP_BINDING NA 252-263
no_ID  
Gene3D G3DSA:2.30.38.10 no description 8.4e-16 472-550
Gene3D G3DSA:3.40.50.980 no description 2e-32 57-258
407-471
HMMPanther PTHR24096 FAMILY 5.5e-178 53-571
Seg seg seg NA 8-16
superfamily SSF56801 Acetyl-CoA 7.1e-107 58-571
Putative transmembrane regions
  From To
TM segments
SOSUI
1 18
Wolf-PSORT
Lj1g3v0814960.1	chlo 9, extr 2, nucl 1, plas 1, vacu 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0814960.1