Miyakogusa Predicted Gene

Lj1g3v0809800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SLG6_LOTJA 505 92.8 92.8 (tr|I3SLG6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G39040.1 417 75.3 84.0 | Symbols: ALS1, ATTAP2, TAP2 | transporter associated with antigen processing protein 2 | chr5:15625660-15629621 FORWARD LENGTH=644
Medicago Medtr4g109720.1 460 83.3 87.8 | ABC transporter B family protein | HC | chr4:45627309-45622091 | 20130731
Soybean Glyma05g00240.1 483 87.5 90.9  
LJGI gnl|LJGI|AV413975 676 100.0 100.0 similar to UniRef100_A7QHZ1 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0809800.1 length: 263 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 8.1e-24 108-234
ProfileScan PS50893 ABC_TRANSPORTER_2 18.728 66-262
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 3.1e-12 93-262
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 206-220
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 7.2e-60 66-263
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 4.1e-08 1-45
Gene3D G3DSA:3.40.50.300 no description 9.9e-72 66-263
HMMPanther PTHR24221 FAMILY 1.3e-196 1-263
HMMPanther PTHR24221:SF48 SUBFAMILY 1.3e-196 1-263
Seg seg seg NA 10-27
Wolf-PSORT
Lj1g3v0809800.1	chlo 10.5, chlo_mito 6.5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0809800.1