Miyakogusa Predicted Gene

Lj1g3v0809690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JZG9_SOYBN 308 82.2 88.8 (tr|I1JZG9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G18600.1 260 66.5 83.5 | Symbols: ATRBL12, RBL12 | RHOMBOID-like protein 12 | chr1:6400647-6402587 FORWARD LENGTH=336
Medicago Medtr4g109700.1 305 74.6 87.8 | S54 family peptidase | HC | chr4:45616780-45611349 | 20130731
Soybean Glyma05g00250.1 308 82.2 88.8  
LJGI gnl|LJGI|TC68131 1136 98.8 98.8 similar to UniRef100_A7QHZ3 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0809690.1 length: 197 aa.
IPR002610 Peptidase S54, rhomboid
method AccNumber shortName E-value location
Molecular Function GO:0004252 serine-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR22936 RHOMBOID-RELATED 1.6e-26 3-197
IPR022764 Peptidase S54, rhomboid domain
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 3.9e-29 2-193
HMMPfam PF01694 Rhomboid 5.3e-25 36-194
no_ID  
superfamily SSF144091 Rhomboid-like 1.7e-29 1-196
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
51 73
76 98
115 137
141 163
Wolf-PSORT
Lj1g3v0809690.1	vacu 10, E.R. 2, extr 1, golg 1, E.R._plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0809690.1 Not targeted -24.278 -20.455 -1.609 19.48% -2.215