Miyakogusa Predicted Gene

Lj1g3v0751200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KA37_SOYBN 623 77.0 85.0 (tr|I1KA37) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G19770.1 425 62.2 75.5 | Symbols: ATVPS9A, VPS9A, VPS9 | Vacuolar sorting protein 9 (VPS9) domain | chr3:6866916-6869114 FORWARD LENGTH=520
Medicago Medtr3g073360.1 555 67.4 74.2 | vacuolar protein sorting-associated protein VPS9 | HC | chr3:33082097-33077957 | 20130731
Soybean Glyma06g11340.1 623 77.0 85.0  
LJGI gnl|LJGI|TC66553 1273 100.0 100.0 similar to UniRef100_A7NV59 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0751200.1 length: 412 aa.
IPR003123 Vacuolar sorting protein 9
method AccNumber shortName E-value location
HMMPfam PF02204 VPS9 4.7e-33 81-185
ProfileScan PS51205 VPS9 42.413 46-190
IPR013995 Vacuolar sorting protein 9, subgroup
HMMSmart SM00167 Domain 2.4e-31 79-198
no_ID  
HMMPanther PTHR23101 RAB 6.5e-85 1-327
HMMPanther PTHR23101:SF25 SUBFAMILY 6.5e-85 1-327
Seg seg seg NA 15-27
339-349
399-411
superfamily SSF109993 VPS9 2.2e-55 1-201
Wolf-PSORT
Lj1g3v0751200.1	nucl 6, nucl_plas 5, cyto 2, plas 2, chlo 1, mito 1, cysk 1, golg 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0751200.1