Miyakogusa Predicted Gene
- Lj1g3v0751180.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I3T8Y1_LOTJA |
619 |
99.7 |
99.7 |
(tr|I3T8Y1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
TAIR_pep |
AT1G77810.2 |
417 |
69.1 |
81.1 |
| Symbols: | Galactosyltransferase family protein | chr1:29260899-29263001 REVERSE LENGTH=384 |
Medicago |
Medtr3g073370.2 |
528 |
85.4 |
92.1 |
| beta-1,3-galactosyltransferase-like protein | HC | chr3:33086595-33082849 | 20130731 |
Soybean |
Glyma04g43340.2 |
522 |
86.0 |
93.3 |
|
LJGI |
gnl|LJGI|TC65626 |
1618 |
100.0 |
100.0 |
similar to UniRef100_A7PKL8 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (60%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0751180.1 |
length: 298 aa. |
IPR002659 |
Glycosyl transferase, family 31 |
method |
AccNumber |
shortName |
E-value |
location |
Biological Process |
GO:0006486 |
protein glycosylation |
|
|
Molecular Function |
GO:0008378 |
galactosyltransferase activity |
|
|
Cellular Component |
GO:0016020 |
membrane |
|
|
HMMPanther |
PTHR11214 |
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASET[16-298] |
2.9e-130 |
|
HMMPfam |
PF01762 |
Galactosyl_T |
6.5e-38 |
139-298 |
IPR025298 |
Domain of unknown function DUF4094 |
HMMPfam |
PF13334 |
DUF4094 |
5.8e-31 |
10-100 |
no_ID |
|
Coil |
coil |
coiled-coil |
NA |
81-102 |
HMMPanther |
PTHR11214:SF66 |
SUBFAMILY |
2.9e-130 |
16-298 |
- Putative transmembrane regions
|
From |
To |
TM segments
SOSUI |
10 |
31 |
- Wolf-PSORT
Lj1g3v0751180.1 mito 4, chlo 2, nucl 2, extr 2, cyto_mito 2, plas 1, vacu 1, E.R. 1, golg 1, cyto_nucl 1, cysk_nucl 1, golg_plas 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj1g3v0751180.1 |
|