Miyakogusa Predicted Gene

Lj1g3v0672680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SXG0_MEDTR 231 89.8 90.6 (tr|I3SXG0) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT4G22380.1 220 84.4 87.5 | Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr4:11812041-11812922 REVERSE LENGTH=128
Medicago Medtr0011s0330.1 231 89.8 90.6 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | HC | scaffold0011:248301-244968 | 20130731
Soybean Glyma13g23690.1 228 88.3 90.6  
LJGI gnl|LJGI|TC60624 767 100.0 100.0 homologue to UniRef100_A7PF22 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0672680.1 length: 128 aa.
IPR002415 H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Cellular Component GO:0005730 nucleolus    
FPrintScan PR00883 NUCLEARHMG 2.9e-27 8-21
21-36
38-48
82-94
IPR004037 Ribosomal protein L7Ae conserved site
Cellular Component GO:0030529 ribonucleoprotein complex    
Biological Process GO:0042254 ribosome biogenesis    
PatternScan PS01082 RIBOSOMAL_L7AE NA 73-90
IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45
HMMPfam PF01248 Ribosomal_L7Ae 9.1e-27 22-111
IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family
FPrintScan PR00881 L7ARS6FAMILY 6.7e-20 35-49
54-67
70-80
80-94
no_ID  
Gene3D G3DSA:3.30.1330.30 no description 7.9e-58 11-127
HMMPanther PTHR23105 RIBOSOMAL 2.2e-72 6-128
HMMPanther PTHR23105:SF11 RIBOSOMAL 2.2e-72 6-128
Seg seg seg NA 61-72
superfamily SSF55315 L30e-like 2.2e-35 4-128
Wolf-PSORT
Lj1g3v0672680.1	cyto 8, chlo 3, nucl 2.5, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0672680.1