Miyakogusa Predicted Gene

Lj1g3v0672350.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LMG8_SOYBN 662 82.1 87.7 (tr|I1LMG8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G04660.1 553 67.3 81.3 | Symbols: APC2 | anaphase-promoting complex/cyclosome 2 | chr2:1624933-1629039 FORWARD LENGTH=865
Medicago Medtr4g082150.2 671 82.4 88.5 | anaphase promoting complex subunit 2 | HC | chr4:31901860-31893593 | 20130731
Soybean Glyma11g34170.1 662 82.1 87.7  
LJGI gnl|LJGI|DC595061 60.0 83.1 83.1 similar to UniRef100_UPI0000EAFF85 Cluster: Contactin-2 precursor (Axonin-1) (Axonal glycoprotein TAG-1), partial (1%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0672350.3 length: 410 aa.
IPR001373 Cullin, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Cellular Component GO:0031461 cullin-RING ubiquitin ligase complex    
Molecular Function GO:0031625 ubiquitin protein ligase binding    
HMMPfam PF00888 Cullin 3.5e-59 68-289
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 3.8e-27 339-406
IPR014786 Anaphase-promoting complex subunit 2, C-terminal
HMMPfam PF08672 APC2 2e-18 349-406
HMMSmart SM01013 Anaphase 1.3e-25 349-408
IPR016158 Cullin homology
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Cellular Component GO:0031461 cullin-RING ubiquitin ligase complex    
Molecular Function GO:0031625 ubiquitin protein ligase binding    
HMMSmart SM00182 Cullin 3.8e-07 74-231
ProfileScan PS50069 CULLIN_2 23.934 78-281
superfamily SSF75632 Cullin 1.5e-27 63-277
no_ID  
Gene3D G3DSA:1.20.1310.10 no description 4.8e-07 70-154
Gene3D G3DSA:4.10.1030.10 no description 7.9e-12 172-239
HMMPanther PTHR11932 CULLIN 1.8e-235 1-406
HMMPanther PTHR11932:SF1 E3 1.8e-235 1-406
Seg seg seg NA 3-19
319-329
382-391
superfamily SSF46785 "Winged 2.4e-22 338-409
Wolf-PSORT
Lj1g3v0672350.3	nucl 7, cyto 5, chlo 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0672350.3