Miyakogusa Predicted Gene

Lj1g3v0672350.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LMG8_SOYBN 351 71.8 80.3 (tr|I1LMG8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G04660.1 293 61.9 75.7 | Symbols: APC2 | anaphase-promoting complex/cyclosome 2 | chr2:1624933-1629039 FORWARD LENGTH=865
Medicago Medtr4g082150.2 346 71.8 79.9 | anaphase promoting complex subunit 2 | HC | chr4:31901860-31893593 | 20130731
Soybean Glyma11g34170.1 351 71.8 80.3  
LJGI gnl|LJGI|DC595061 60.0 83.1 83.1 similar to UniRef100_UPI0000EAFF85 Cluster: Contactin-2 precursor (Axonin-1) (Axonal glycoprotein TAG-1), partial (1%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0672350.2 length: 255 aa.
IPR001373 Cullin, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Cellular Component GO:0031461 cullin-RING ubiquitin ligase complex    
Molecular Function GO:0031625 ubiquitin protein ligase binding    
HMMPfam PF00888 Cullin 1.8e-25 31-134
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 1.7e-27 184-251
IPR014786 Anaphase-promoting complex subunit 2, C-terminal
HMMPfam PF08672 APC2 9.6e-19 194-251
HMMSmart SM01013 Anaphase 1.3e-25 194-253
IPR016158 Cullin homology
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Cellular Component GO:0031461 cullin-RING ubiquitin ligase complex    
Molecular Function GO:0031625 ubiquitin protein ligase binding    
ProfileScan PS50069 CULLIN_2 12.680 11-126
superfamily SSF75632 Cullin 5.8e-10 31-122
no_ID  
Gene3D G3DSA:4.10.1030.10 no description 6.1e-07 31-84
HMMPanther PTHR11932 CULLIN 7.2e-123 22-251
HMMPanther PTHR11932:SF1 E3 7.2e-123 22-251
Seg seg seg NA 164-174
227-236
superfamily SSF46785 "Winged 2.4e-22 183-254
Wolf-PSORT
Lj1g3v0672350.2	chlo 6, vacu 3, chlo_mito 3, nucl 2, extr 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0672350.2