Miyakogusa Predicted Gene

Lj1g3v0662090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JB37_SOYBN 693 67.9 80.6 (tr|I1JB37) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G80270.3 507 50.9 70.4 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | chr1:30181265-30183331 FORWARD LENGTH=596
Medicago Medtr1g050750.1 598 66.2 79.0 | DNA-binding protein | HC | chr1:19651324-19646399 | 20130731
Soybean Glyma02g00270.1 693 67.9 80.6  
LJGI gnl|LJGI|TC61255 1025 99.6 99.6 similar to UniRef100_A7QJH1 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0662090.1 length: 539 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0065 451-479
HMMPfam PF13812 PPR_3 0.03 313-345
484-517
HMMTigr TIGR00756 PPR: 0.00046 451-481
ProfileScan PS51375 PPR 9.240 242-276
311-345
381-411
346-380
413-443
447-481
482-517
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.8e-06 343-517
no_ID  
HMMPanther PTHR24015 FAMILY 9.2e-216 73-539
HMMPanther PTHR24015:SF26 PREDICTED: 9.2e-216 73-539
Seg seg seg NA 3-13
430-441
Wolf-PSORT
Lj1g3v0662090.1	chlo 9, mito 4.5, cyto_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0662090.1