Miyakogusa Predicted Gene
- Lj1g3v0639770.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
G7JW28_MEDTR |
155 |
41.7 |
58.3 |
(tr|G7JW28) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g012510 PE=4 SV=1 |
TAIR_pep |
AT3G17450.1 |
106 |
33.3 |
47.7 |
| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877 |
Medicago |
Medtr7g078930.1 |
48.9 |
52.2 |
69.6 |
| hypothetical protein | LC | chr7:29889325-29890440 | 20130731 |
Soybean |
Glyma15g21390.1 |
106 |
31.9 |
49.5 |
|
LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0639770.1 |
length: 212 aa. |
IPR007021 |
Domain of unknown function DUF659 |
method |
AccNumber |
shortName |
E-value |
location |
HMMPfam |
PF04937 |
DUF659 |
5.2e-34 |
2-119 |
IPR012337 |
Ribonuclease H-like domain |
Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
superfamily |
SSF53098 |
Ribonuclease |
4.3e-14 |
1-211 |
no_ID |
|
HMMPanther |
PTHR32166 |
FAMILY |
3.9e-55 |
14-210 |
HMMPanther |
PTHR32166:SF0 |
SUBFAMILY |
3.9e-55 |
14-210 |
Seg |
seg |
seg |
NA |
52-64 |
- Wolf-PSORT
Lj1g3v0639770.1 cyto 7, nucl 4, extr 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj1g3v0639770.1 |
|