Miyakogusa Predicted Gene
- Lj1g3v0579450.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TJB5_SOYBN |
84.0 |
62.3 |
66.7 |
(tr|C6TJB5) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT5G18940.1 |
80.9 |
59.4 |
66.7 |
| Symbols: | Mo25 family protein | chr5:6325972-6328097 FORWARD LENGTH=345 |
| Medicago |
Medtr2g021040.1 |
78.2 |
59.4 |
63.8 |
| structural constituent of ribosome protein, putative | HC | chr2:7107798-7113369 | 20130731 |
| Soybean |
Glyma13g28260.1 |
84.0 |
62.3 |
66.7 |
|
| LJGI |
gnl|LJGI|TC59314 |
323 |
94.7 |
94.7 |
similar to UniRef100_A7NWD2 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0579450.1 |
length: 69 aa. |
| IPR011989 |
Armadillo-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
2.4e-26 |
1-66 |
| IPR013878 |
Mo25-like |
| HMMPanther |
PTHR10182 |
CALCIUM-BINDING |
4.4e-27 |
1-66 |
| HMMPfam |
PF08569 |
Mo25 |
1.3e-27 |
1-67 |
| IPR016024 |
Armadillo-type fold |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
1.3e-21 |
1-68 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
45-64 |
- Wolf-PSORT
Lj1g3v0579450.1 cyto_nucl 5.33333, cyto 4.5, cyto_E.R. 3.83333, mito 2, E.R. 1.5, chlo_mito 1.5, mito_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0579450.1 |
|