Miyakogusa Predicted Gene

Lj1g3v0536740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SDR1_LOTJA 328 100.0 100.0 (tr|I3SDR1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G69410.1 292 86.8 96.9 | Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongation factor 5A-3 | chr1:26089301-26090194 FORWARD LENGTH=158
Medicago Medtr4g109130.1 310 93.1 98.1 | eukaryotic translation initiation factor 5A4 | HC | chr4:45278237-45276043 | 20130731
Soybean Glyma17g11130.1 321 96.9 99.4  
LJGI gnl|LJGI|TC60132 957 100.0 100.0 homologue to UniRef100_Q71F50 Cluster: Eukaryotic translation initiation factor 5A isoform II; n=1; Hevea brasiliensis|Rep: Eukaryotic translation initiation factor 5A isoform II - Hevea brasiliensis (Para rubber tree), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0536740.1 length: 159 aa.
IPR001884 Translation elongation factor IF5A
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0008612 peptidyl-lysine modification to hypusine    
Molecular Function GO:0043022 ribosome binding    
Biological Process GO:0045901 positive regulation of translational elongation    
Biological Process GO:0045905 positive regulation of translational termination    
HMMPIR PIRSF003025 Translation 3.4e-98 1-158
HMMPanther PTHR11673 TRANSLATION 8.1e-101 2-159
HMMTigr TIGR00037 eIF_5A: 7.2e-41 17-153
IPR005824 KOW
HMMPfam PF00467 KOW 4.7e-05 31-49
IPR008991 Translation protein SH3-like domain
superfamily SSF50104 Translation 7.6e-27 14-93
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.3e-32 86-157
superfamily SSF50249 Nucleic 3.5e-27 86-157
IPR014722 Ribosomal protein L2 domain 2
Gene3D G3DSA:2.30.30.30 no description 7.5e-41 15-84
IPR019769 Translation elongation factor, IF5A, hypusine site
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0006452 translational frameshifting    
Molecular Function GO:0043022 ribosome binding    
Biological Process GO:0045901 positive regulation of translational elongation    
Biological Process GO:0045905 positive regulation of translational termination    
PatternScan PS00302 IF5A_HYPUSINE NA 50-57
IPR020189 Translation elongation factor, IF5A C-terminal
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0006452 translational frameshifting    
Molecular Function GO:0043022 ribosome binding    
Biological Process GO:0045901 positive regulation of translational elongation    
Biological Process GO:0045905 positive regulation of translational termination    
HMMPfam PF01287 eIF-5a 2.4e-29 85-154
Wolf-PSORT
Lj1g3v0536740.1	cyto 7, chlo 3, cysk 2, nucl 1, pero 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0536740.1