Miyakogusa Predicted Gene

Lj1g3v0526480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7KW11_SOYBN 1286 70.7 78.6 (tr|K7KW11) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G74360.1 1019 55.8 71.0 | Symbols: | Leucine-rich repeat protein kinase family protein | chr1:27954299-27957911 FORWARD LENGTH=1106
Medicago Medtr3g437630.1 1246 69.6 79.5 | LRR receptor-like kinase family protein | HC | chr3:12789398-12783814 | 20130731
Soybean Glyma04g32920.1 1252 70.7 79.0  
LJGI gnl|LJGI|AV408059 547 99.6 99.6 weakly similar to UniRef100_A7PDH2 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0526480.1 length: 911 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 1.4e-46 629-892
ProfileScan PS50011 PROTEIN_KINASE_DOM 38.040 628-897
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.24 28-40
244-265
463-484
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 2.5e-36 628-896
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 3.9e+02 120-144
193-217
265-289
460-484
IPR008271 Serine/threonine-protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00108 PROTEIN_KINASE_ST NA 750-762
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 3.1e-75 598-902
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 9.6e-09 525-641
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 634-657
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 1.8e-22 628-894
no_ID  
Gene3D G3DSA:1.10.510.10 no description 7e-40 697-894
Gene3D G3DSA:3.30.200.20 no description 5.8e-20 642-696
Gene3D G3DSA:3.80.10.10 no description 1.4e-24 4-174
175-313
396-505
HMMPanther PTHR24420 FAMILY 0 5-900
HMMPanther PTHR24420:SF16 SUBFAMILY 0 5-900
HMMPfam PF13516 LRR_6 0.35 96-117
193-215
Seg seg seg NA 34-48
115-134
261-278
554-567
590-599
superfamily SSF52047 RNI-like 6.1e-60 7-312
superfamily SSF52058 L 9.4e-20 394-510
Putative transmembrane regions
  From To
TM segments
SOSUI
550 572
Wolf-PSORT
Lj1g3v0526480.1	chlo 7, nucl 2, cyto 2, cysk 2, cyto_nucl 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0526480.1