Miyakogusa Predicted Gene

Lj1g3v0524400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6SWN9_SOYBN 281 70.5 74.0 (tr|C6SWN9) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT3G01790.2 227 70.3 81.1 | Symbols: | Ribosomal protein L13 family protein | chr3:283880-285583 REVERSE LENGTH=205
Medicago Medtr3g082760.1 264 78.7 85.8 | 50S ribosomal protein L13 | HC | chr3:37350483-37354635 | 20130731
Soybean Glyma19g36450.1 281 70.5 74.0  
LJGI gnl|LJGI|TC67861 1096 96.6 96.6 similar to UniRef100_A7PLS6 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (84%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0524400.1 length: 198 aa.
IPR005822 Ribosomal protein L13
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPIR PIRSF002181 Ribosomal 7.4e-63 11-188
HMMPanther PTHR11545 RIBOSOMAL 3.8e-59 25-171
HMMPfam PF00572 Ribosomal_L13 6.3e-44 26-150
IPR005823 Ribosomal protein L13, bacterial-type
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMTigr TIGR01066 rplM_bact: 1.1e-45 25-145
IPR023564 Ribosomal protein L13 domain
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Gene3D G3DSA:3.90.1180.10 no description 2.6e-49 25-150
superfamily SSF52161 Ribosomal 1.9e-38 26-178
no_ID  
Coil coil coiled-coil NA 169-197
HMMPanther PTHR11545:SF2 50S 3.8e-59 25-171
Seg seg seg NA 124-134
156-183
Wolf-PSORT
Lj1g3v0524400.1	cyto 5, chlo 4, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0524400.1