Miyakogusa Predicted Gene

Lj1g3v0488910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MNU1_SOYBN 1005 89.5 93.0 (tr|I1MNU1) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G03960.1 919 81.9 91.0 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr3:1024432-1027604 FORWARD LENGTH=549
Medicago Medtr1g030650.1 993 89.6 94.1 | TCP-1/cpn60 chaperonin family protein | HC | chr1:10665518-10675341 | 20130731
Soybean Glyma16g26920.1 1005 89.5 93.0  
LJGI gnl|LJGI|TC66426 3253 100.0 100.0 similar to UniRef100_A7PW56 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0488910.1 length: 545 aa.
IPR002194 Chaperonin TCP-1, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
PatternScan PS00750 TCP1_1 NA 43-55
PatternScan PS00751 TCP1_2 NA 64-80
IPR002423 Chaperonin Cpn60/TCP-1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0044267 cellular protein metabolic process    
HMMPanther PTHR11353 CHAPERONIN 1.7e-276 11-545
HMMPfam PF00118 Cpn60_TCP1 1.6e-132 38-529
superfamily SSF48592 GroEL 2.4e-75 17-529
IPR012721 T-complex protein 1, theta subunit
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
HMMPanther PTHR11353:SF19 CHAPERONIN 1.7e-276 11-545
HMMTigr TIGR02346 chap_CCT_theta: 3.8e-248 9-538
IPR017998 Chaperone tailless complex polypeptide 1 (TCP-1)
FPrintScan PR00304 TCOMPLEXTCP1 1.7e-19 40-56
62-80
92-111
376-398
410-422
IPR027409 GroEL-like apical domain
Gene3D G3DSA:3.50.7.10 no description 7.8e-33 215-368
superfamily SSF52029 GroEL 4e-39 220-369
IPR027413 GroEL-like equatorial domain
Gene3D G3DSA:1.10.560.10 no description 6.8e-34 19-204
369-529
no_ID  
Coil coil coiled-coil NA 264-285
Seg seg seg NA 349-365
superfamily SSF54849 GroEL-intermediate 6.2e-24 156-409
Wolf-PSORT
Lj1g3v0488910.1	cyto 6, chlo 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0488910.1