Miyakogusa Predicted Gene
- Lj1g3v0438910.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9IJR5_POPTR |
229 |
73.9 |
87.3 |
(tr|B9IJR5) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_258837 PE=4 SV=1 |
| TAIR_pep |
AT1G74790.1 |
228 |
72.8 |
83.8 |
| Symbols: | catalytics | chr1:28098912-28101673 FORWARD LENGTH=695 |
| Medicago |
Medtr4g107400.1 |
211 |
66.9 |
83.1 |
| hipl2 protein precursor | HC | chr4:44415144-44409998 | 20130731 |
| Soybean |
Glyma06g20070.1 |
224 |
70.1 |
87.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0438910.1 |
length: 154 aa. |
| IPR011041 |
Soluble quinoprotein glucose/sorbosone dehydrogenase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| superfamily |
SSF50952 |
Soluble |
5.2e-07 |
7-81 |
| IPR011042 |
Six-bladed beta-propeller, TolB-like |
| Gene3D |
G3DSA:2.120.10.30 |
no description |
1.6e-31 |
6-136 |
| IPR012938 |
Glucose/Sorbosone dehydrogenase |
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Molecular Function |
GO:0016901 |
oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor |
|
|
| Molecular Function |
GO:0048038 |
quinone binding |
|
|
| HMMPfam |
PF07995 |
GSDH |
7e-13 |
8-74 |
| no_ID |
|
| HMMPanther |
PTHR19328 |
PQQ |
5e-53 |
3-134 |
| HMMPanther |
PTHR19328:SF13 |
THYROID |
5e-53 |
3-134 |
- Wolf-PSORT
Lj1g3v0438910.1 cyto 4, chlo 3, extr 3, cyto_nucl 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0438910.1 |
|