Miyakogusa Predicted Gene
- Lj1g3v0438900.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5WDG2_PRUPE |
332 |
73.0 |
88.2 |
(tr|M5WDG2) Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017111mg PE=4 SV=1 |
| TAIR_pep |
AT5G62630.1 |
280 |
61.8 |
78.9 |
| Symbols: HIPL2 | hipl2 protein precursor | chr5:25143719-25146390 REVERSE LENGTH=696 |
| Medicago |
Medtr4g107400.1 |
272 |
59.8 |
79.9 |
| hipl2 protein precursor | HC | chr4:44415144-44409998 | 20130731 |
| Soybean |
Glyma06g20070.1 |
290 |
62.3 |
80.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0438900.1 |
length: 204 aa. |
| IPR011042 |
Six-bladed beta-propeller, TolB-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.120.10.30 |
no description |
1.8e-37 |
1-202 |
| IPR012938 |
Glucose/Sorbosone dehydrogenase |
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Molecular Function |
GO:0016901 |
oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor |
|
|
| Molecular Function |
GO:0048038 |
quinone binding |
|
|
| HMMPfam |
PF07995 |
GSDH |
2.1e-09 |
41-201 |
| no_ID |
|
| HMMPanther |
PTHR19328 |
PQQ |
2.5e-66 |
1-204 |
| HMMPanther |
PTHR19328:SF13 |
THYROID |
2.5e-66 |
1-204 |
- Wolf-PSORT
Lj1g3v0438900.1 nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0438900.1 |
|