Miyakogusa Predicted Gene
- Lj1g3v0437870.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LSR3_SOYBN |
619 |
91.9 |
95.3 |
(tr|K7LSR3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G17680.2 |
406 |
66.8 |
81.3 |
| Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr1:6076388-6082160 FORWARD LENGTH=896 |
| Medicago |
Medtr4g079390.1 |
548 |
80.9 |
90.3 |
| general transcription factor 3C-like protein | HC | chr4:30684330-30698647 | 20130731 |
| Soybean |
Glyma11g10840.1 |
610 |
90.6 |
95.6 |
|
| LJGI |
gnl|LJGI|TC71144 |
1146 |
100.0 |
100.0 |
similar to UniRef100_A7QMM0 Cluster: Chromosome chr19 scaffold_126, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_126, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0437870.1 |
length: 320 aa. |
| IPR011990 |
Tetratricopeptide-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Gene3D |
G3DSA:1.25.40.10 |
no description |
1.6e-08 |
169-315 |
| no_ID |
|
| HMMPanther |
PTHR23082 |
TRANSCRIPTION |
2.2e-89 |
11-320 |
| superfamily |
SSF48452 |
TPR-like |
8.3e-08 |
158-315 |
- Wolf-PSORT
Lj1g3v0437870.1 chlo 3, E.R. 3, cyto 2, plas 2, chlo_mito 2, E.R._vacu 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0437870.1 |
|