Miyakogusa Predicted Gene

Lj1g3v0415900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7KMM8_SOYBN 487 67.2 81.2 (tr|K7KMM8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G48160.2 357 52.8 68.9 | Symbols: DEL1, E2L3, E2FE | DP-E2F-like 1 | chr3:17783641-17785846 FORWARD LENGTH=403
Medicago Medtr4g106540.3 464 64.8 77.3 | E2F transcription factor-E2FE-like protein | HC | chr4:44194429-44190467 | 20130731
Soybean Glyma17g10130.1 479 66.5 81.2  
LJGI gnl|LJGI|GO012178 1231 99.5 99.5 similar to UniRef100_A7PD78 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0415900.1 length: 372 aa.
IPR003316 Transcription factor E2F/dimerisation partner (TDP)
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005667 transcription factor complex    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02319 E2F_TDP 1.6e-21 15-80
146-225
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 6.3e-23 11-81
142-227
IPR015633 E2F Family
HMMPanther PTHR12081 TRANSCRIPTION 1.2e-113 9-368
no_ID  
HMMPanther PTHR12081:SF7 TRANSCRIPTION 1.2e-113 9-368
Seg seg seg NA 2-8
superfamily SSF46785 "Winged 1.5e-16 14-79
145-224
Wolf-PSORT
Lj1g3v0415900.1	nucl 6, chlo 4, mito 3, cysk_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0415900.1