Miyakogusa Predicted Gene
- Lj1g3v0415390.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6T4Z5_SOYBN |
130 |
61.7 |
75.5 |
(tr|C6T4Z5) Putative uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G62575.1 |
105 |
63.3 |
74.4 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G47833.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25117542-25118565 FORWARD LENGTH=99 |
| Medicago |
Medtr3g078310.1 |
129 |
64.9 |
74.5 |
| hypothetical protein | HC | chr3:35284990-35281014 | 20130731 |
| Soybean |
Glyma04g35050.1 |
129 |
61.7 |
74.5 |
|
| LJGI |
gnl|LJGI|BW597200 |
565 |
100.0 |
100.0 |
similar to UniRef100_A7PD60 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (85%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0415390.1 |
length: 94 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
40-51 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
66 |
88 |
- Wolf-PSORT
Lj1g3v0415390.1 chlo 5, nucl 2.5, cyto_nucl 2.5, cyto 1.5, mito 1, plas 1, extr 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0415390.1 |
|