Miyakogusa Predicted Gene

Lj1g3v0415370.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SFD8_LOTJA 369 100.0 100.0 (tr|I3SFD8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G50090.1 150 49.7 64.6 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:20369961-20370878 FORWARD LENGTH=159

Medicago Medtr3g078300.1 236 65.4 74.9 | DUF4228 domain protein | HC | chr3:35276942-35278238 | 20130731

Soybean Glyma06g19670.1 230 63.2 72.1

LJGI gnl|LJGI|TC64221 1065 100.0 100.0 weakly similar to UniRef100_Q53J17 Cluster: T10O24.15, related; n=1; Solanum lycopersicum|Rep: T10O24.15, related - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (74%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v0415370.1 length: 177 aa.

IPR025322 Protein of unknown function DUF4228

method AccNumber shortName E-value location

HMMPfam PF14009 DUF4228 9.3e-21 1-174

Wolf-PSORT

Lj1g3v0415370.1 cyto 5.5, nucl 4, cyto_E.R. 3.5, cysk 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v0415370.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SFD8_LOTJA	369	100.0	100.0	(tr\|I3SFD8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G50090.1	150	49.7	64.6	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). \| chr5:20369961-20370878 FORWARD LENGTH=159
Medicago	Medtr3g078300.1	236	65.4	74.9	\| DUF4228 domain protein \| HC \| chr3:35276942-35278238 \| 20130731
Soybean	Glyma06g19670.1	230	63.2	72.1
LJGI	gnl\|LJGI\|TC64221	1065	100.0	100.0	weakly similar to UniRef100_Q53J17 Cluster: T10O24.15, related; n=1; Solanum lycopersicum\|Rep: T10O24.15, related - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (74%)

IPR025322	Protein of unknown function DUF4228
Lj1g3v0415370.1				length: 177 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF14009	DUF4228	9.3e-21	1-174