Miyakogusa Predicted Gene

Lj1g3v0415230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T588_LOTJA 404 92.4 92.4 (tr|I3T588) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G62880.1 358 80.5 85.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-like 10 | chr5:25237236-25238939 FORWARD LENGTH=215
Medicago Medtr3g078260.1 393 88.6 91.5 | Rho-like GTP-binding protein | HC | chr3:35252654-35257026 | 20130731
Soybean Glyma04g35110.1 382 87.0 90.9  
LJGI gnl|LJGI|TC66699 1251 99.7 99.7 similar to UniRef100_Q0PZE6 Cluster: Small GTPase; n=1; Gossypium hirsutum|Rep: Small GTPase - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0415230.1 length: 211 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 1.7e-35 9-30
32-48
49-71
111-124
157-179
HMMPfam PF00071 Ras 1.4e-50 10-180
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 3.4e-112 11-182
ProfileScan PS51420 RHO 24.738 2-179
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 4.1e-26 9-182
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 9.9e-33 9-173
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 4.3e-20 6-182
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.6e-54 4-192
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.9e-62 4-195
HMMPanther PTHR24072 FAMILY 1e-161 2-199
HMMPanther PTHR24072:SF64 SUBFAMILY 1e-161 2-199
Seg seg seg NA 181-195
Wolf-PSORT
Lj1g3v0415230.1	chlo 6, cyto 4, plas 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0415230.1