Miyakogusa Predicted Gene

Lj1g3v0414710.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL E9SEK1_RUMAL 58.5 25.9 44.8 (tr|E9SEK1) Bacterial surface protein 26-residue PARCEL repeat (3 repeats) OS=Ruminococcus albus 8 GN=CUS_5760 PE=4 SV=1

TAIR_pep --No_Hits--

Medicago --No_Hits--

Soybean --No_Hits--

LJGI gnl|LJGI|TC76940 222 82.6 82.6 similar to UniRef100_Q940G9 Cluster: Periaxin-like protein; n=1; Arabidopsis thaliana|Rep: Periaxin-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (51%)

Putative transmembrane regions

From To

TM segments
SOSUI 187 208

Wolf-PSORT

Lj1g3v0414710.1 chlo 9, extr 3, nucl 1, vacu 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v0414710.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	E9SEK1_RUMAL	58.5	25.9	44.8	(tr\|E9SEK1) Bacterial surface protein 26-residue PARCEL repeat (3 repeats) OS=Ruminococcus albus 8 GN=CUS_5760 PE=4 SV=1
TAIR_pep	--No_Hits--
Medicago	--No_Hits--
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC76940	222	82.6	82.6	similar to UniRef100_Q940G9 Cluster: Periaxin-like protein; n=1; Arabidopsis thaliana\|Rep: Periaxin-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (51%)