Miyakogusa Predicted Gene

Lj1g3v0410150.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J5H4_MEDTR 684 69.6 76.0 (tr|G7J5H4) Kinesin light chain OS=Medicago truncatula GN=MTR_3g077950 PE=4 SV=1
TAIR_pep AT1G27500.1 362 61.4 77.5 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:9551629-9553654 REVERSE LENGTH=650
Medicago Medtr3g077950.2 684 69.6 76.0 | kinesin light chain | HC | chr3:35118067-35113060 | 20130731
Soybean Glyma06g19430.1 533 85.0 92.0  
LJGI gnl|LJGI|TC68201 1132 99.5 99.5 similar to UniRef100_A7PD12 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0410150.1 length: 491 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 6.7e-05 455-480
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.8e-05 236-343
344-408
418-483
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 8.890 451-484
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF13181 TPR_8 0.12 330-350
HMMSmart SM00028 Tetratricopeptide 2.9 284-317
327-360
369-402
451-484
ProfileScan PS50005 TPR 8.880 284-317
327-360
451-484
no_ID  
HMMPanther PTHR19959 KINESIN 1.3e-40 263-490
HMMPanther PTHR19959:SF23 SUBFAMILY 1.3e-40 263-490
HMMPfam PF13374 TPR_10 0.21 286-313
Seg seg seg NA 100-135
151-165
172-188
superfamily SSF48452 TPR-like 1.4e-13 237-480
Wolf-PSORT
Lj1g3v0410150.1	nucl 9, cyto 3, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0410150.1