Miyakogusa Predicted Gene

Lj1g3v0399000.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J5E8_MEDTR 1089 79.0 83.9 (tr|G7J5E8) Boron transporter OS=Medicago truncatula GN=MTR_3g077670 PE=4 SV=1
TAIR_pep AT2G47160.1 909 69.4 77.7 | Symbols: BOR1 | HCO3- transporter family | chr2:19357740-19360787 REVERSE LENGTH=704
Medicago Medtr3g077670.1 1089 79.0 83.9 | boron transporter-like protein | HC | chr3:34928630-34923242 | 20130731
Soybean Glyma06g19290.1 1086 78.6 84.2  
LJGI gnl|LJGI|TC61896 1146 100.0 100.0 similar to UniRef100_A7PCZ0 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0399000.2 length: 696 aa.
IPR003020 Bicarbonate transporter, eukaryotic
method AccNumber shortName E-value location
Molecular Function GO:0005452 inorganic anion exchanger activity    
Biological Process GO:0006820 anion transport    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR11453 ANION 0 1-644
IPR011531 Bicarbonate transporter, C-terminal
Biological Process GO:0006820 anion transport    
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF00955 HCO3_cotransp 4.9e-16 3-180
204-372
462-552
no_ID  
Gene3D G3DSA:1.10.287.570 no description 5.3e-06 18-59
HMMPanther PTHR11453:SF6 ANION 0 1-644
Seg seg seg NA 133-144
207-220
338-353
549-562
600-613
650-663
Putative transmembrane regions
  From To
TM segments
SOSUI		 32 54
79 101
126 148
150 172
196 218
235 257
291 313
335 357
467 488
491 513
538 560
567 589
Wolf-PSORT
Lj1g3v0399000.2	plas 12, vacu 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0399000.2