Miyakogusa Predicted Gene

Lj1g3v0395770.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SIF7_LOTJA 617 81.7 82.0 (tr|I3SIF7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G17990.1 465 69.1 77.4 | Symbols: TRP1, pat1 | tryptophan biosynthesis 1 | chr5:5957330-5959681 FORWARD LENGTH=444

Medicago Medtr3g077590.1 526 75.7 82.5 | anthranilate phosphoribosyltransferase | HC | chr3:34876949-34880512 | 20130731

Soybean Glyma04g35820.3 511 72.7 82.5

LJGI gnl|LJGI|TC66547 1080 99.3 99.3 similar to UniRef100_Q02166 Cluster: Anthranilate phosphoribosyltransferase, chloroplast precursor; n=1; Arabidopsis thaliana|Rep: Anthranilate phosphoribosyltransferase, chloroplast precursor - Arabidopsis thaliana (Mouse-ear cress), partial (33%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v0395770.1 length: 394 aa.

IPR000312 Glycosyl transferase, family 3

method AccNumber shortName E-value location

Biological Process GO:0008152 metabolic process

Molecular Function GO:0016757 transferase activity, transferring glycosyl groups

Gene3D G3DSA:3.40.1030.10 no description 2.8e-93 241-393

HMMPfam PF00591 Glycos_transf_3 1.6e-94 131-379

superfamily SSF52418 Nucleoside 3.3e-87 127-389

IPR005940 Anthranilate phosphoribosyl transferase

Biological Process GO:0000162 tryptophan biosynthetic process

Molecular Function GO:0004048 anthranilate phosphoribosyltransferase activity

HAMAP MF_00211 TrpD 35.669 63-389

HMMTigr TIGR01245 trpD: 1.7e-123 65-387

IPR017459 Glycosyl transferase family 3, N-terminal domain

HMMPfam PF02885 Glycos_trans_3N 1.5e-15 62-123

superfamily SSF47648 Nucleoside 4.1e-15 59-127

no_ID

Gene3D G3DSA:1.20.970.10 no description 1e-33 207-240

HMMPanther PTHR11922 GMP 3.6e-155 28-391

HMMPanther PTHR11922:SF6 TRP1 3.6e-155 28-391

Seg seg seg NA 7-20
25-40
130-142
167-178
343-355

Wolf-PSORT

Lj1g3v0395770.1 chlo 10, E.R. 2, mito 1, vacu 1, E.R._plas 1, cyto_E.R. 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v0395770.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SIF7_LOTJA	617	81.7	82.0	(tr\|I3SIF7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G17990.1	465	69.1	77.4	\| Symbols: TRP1, pat1 \| tryptophan biosynthesis 1 \| chr5:5957330-5959681 FORWARD LENGTH=444
Medicago	Medtr3g077590.1	526	75.7	82.5	\| anthranilate phosphoribosyltransferase \| HC \| chr3:34876949-34880512 \| 20130731
Soybean	Glyma04g35820.3	511	72.7	82.5
LJGI	gnl\|LJGI\|TC66547	1080	99.3	99.3	similar to UniRef100_Q02166 Cluster: Anthranilate phosphoribosyltransferase, chloroplast precursor; n=1; Arabidopsis thaliana\|Rep: Anthranilate phosphoribosyltransferase, chloroplast precursor - Arabidopsis thaliana (Mouse-ear cress), partial (33%)

IPR000312	Glycosyl transferase, family 3
Lj1g3v0395770.1				length: 394 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0008152	metabolic process
Molecular Function	GO:0016757	transferase activity, transferring glycosyl groups
Gene3D	G3DSA:3.40.1030.10	no description	2.8e-93	241-393
HMMPfam	PF00591	Glycos_transf_3	1.6e-94	131-379
superfamily	SSF52418	Nucleoside	3.3e-87	127-389
IPR005940	Anthranilate phosphoribosyl transferase
Biological Process	GO:0000162	tryptophan biosynthetic process
Molecular Function	GO:0004048	anthranilate phosphoribosyltransferase activity
HAMAP	MF_00211	TrpD	35.669	63-389
HMMTigr	TIGR01245	trpD:	1.7e-123	65-387
IPR017459	Glycosyl transferase family 3, N-terminal domain
HMMPfam	PF02885	Glycos_trans_3N	1.5e-15	62-123
superfamily	SSF47648	Nucleoside	4.1e-15	59-127
no_ID
Gene3D	G3DSA:1.20.970.10	no description	1e-33	207-240
HMMPanther	PTHR11922	GMP	3.6e-155	28-391
HMMPanther	PTHR11922:SF6	TRP1	3.6e-155	28-391
Seg	seg	seg	NA	7-20 25-40 130-142 167-178 343-355