Miyakogusa Predicted Gene

Lj1g3v0365160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SNU2_LOTJA 162 82.4 82.4 (tr|I3SNU2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G05990.1 86.3 45.0 65.1 | Symbols: RHS1 | EF hand calcium-binding protein family | chr1:1818588-1819040 FORWARD LENGTH=150
Medicago Medtr4g115170.1 132 63.9 68.1 | EF hand calcium-binding family protein | HC | chr4:47539472-47538205 | 20130731
Soybean Glyma17g12040.1 140 70.3 77.5  
LJGI gnl|LJGI|GO012401 565 97.0 97.0 weakly similar to UniRef100_Q9SCA1 Cluster: Calcium-binding protein; n=1; Lotus japonicus|Rep: Calcium-binding protein - Lotus japonicus, partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0365160.1 length: 142 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 8e-05 34-62
79-107
ProfileScan PS50222 EF_HAND_2 10.357 30-65
75-110
113-142
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 1.6e-23 30-140
HMMPfam PF13499 EF_hand_5 4e-09 80-135
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 43-55
88-100
no_ID  
HMMPanther PTHR10891 EF-HAND 8.9e-28 32-141
HMMPanther PTHR10891:SF141CALCIUM-BINDING PROTEIN 8.9e-28 32-141
HMMPfam PF13833 EF_hand_6 4.6e-05 33-56
Seg seg seg NA 4-12
64-78
superfamily SSF47473 EF-hand 2e-20 14-141
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
Wolf-PSORT
Lj1g3v0365160.1	extr 5, chlo 3, cyto 3, nucl 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0365160.1