Miyakogusa Predicted Gene

Lj1g3v0362060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KZY5_SOYBN 555 68.8 75.5 (tr|I1KZY5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G17120.1 468 61.1 70.1 | Symbols: CAT8 | cationic amino acid transporter 8 | chr1:5851964-5853736 FORWARD LENGTH=590
Medicago Medtr8g461380.1 534 68.6 75.2 | cationic amino acid transporter | HC | chr8:21598395-21596115 | 20130731
Soybean Glyma09g01230.1 537 68.5 75.2  
LJGI gnl|LJGI|FS347744 864 100.0 100.0 similar to UniRef100_A7P322 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0362060.1 length: 410 aa.
IPR002293 Amino acid/polyamine transporter I
method AccNumber shortName E-value location
Biological Process GO:0003333 amino acid transmembrane transport    
Molecular Function GO:0015171 amino acid transmembrane transporter activity    
Cellular Component GO:0016020 membrane    
HMMPIR PIRSF006060 Amino 0.00017 1-345
HMMPanther PTHR11785 AMINO 3.8e-121 1-384
IPR015606 Cationic amino acid transporter
HMMPanther PTHR11785:SF53 CATIONIC 3.8e-121 1-384
no_ID  
HMMPfam PF13520 AA_permease_2 1.2e-36 26-320
HMMPfam PF13906 AA_permease_C 7.3e-15 332-381
Seg seg seg NA 45-66
233-250
283-294
297-312
Putative transmembrane regions
  From To
TM segments
SOSUI
20 42
48 70
76 98
121 143
161 183
215 237
240 261
278 300
302 324
332 354
361 383
Wolf-PSORT
Lj1g3v0362060.1	vacu 10, plas 2, cyto 1, extr 1, nucl_plas 1, golg_plas 1, cysk_plas 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0362060.1