Miyakogusa Predicted Gene
- Lj1g3v0342020.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KKZ1_SOYBN |
607 |
82.5 |
91.8 |
(tr|K7KKZ1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G63080.1 |
475 |
65.9 |
79.1 |
| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:25300026-25302321 REVERSE LENGTH=462 |
| Medicago |
Medtr3g077420.1 |
591 |
82.7 |
90.9 |
| transcription factor, putative | HC | chr3:34751208-34755524 | 20130731 |
| Soybean |
Glyma04g35940.1 |
563 |
77.1 |
86.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0342020.1 |
length: 344 aa. |
| IPR003347 |
JmjC domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00558 |
A |
2.3e-16 |
122-302 |
| ProfileScan |
PS51184 |
JMJC |
34.893 |
130-302 |
| no_ID |
|
| Gene3D |
G3DSA:2.60.120.650 |
no description |
4e-26 |
15-285 |
| HMMPanther |
PTHR12480 |
PHOSPHATIDYLSERINE |
2e-147 |
4-340 |
| HMMPanther |
PTHR12480:SF6 |
JMJC |
2e-147 |
4-340 |
| HMMPfam |
PF13621 |
Cupin_8 |
1.8e-26 |
20-287 |
| superfamily |
SSF51197 |
Clavaminate |
8.3e-52 |
3-335 |
- Wolf-PSORT
Lj1g3v0342020.1 chlo 7, nucl 3, cyto 3, cyto_nucl 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0342020.1 |
|