Miyakogusa Predicted Gene

Lj1g3v0318660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J4T9_MEDTR 941 80.8 89.1 (tr|G7J4T9) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g077200 PE=4 SV=1
TAIR_pep AT1G64310.1 566 51.3 69.5 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:23866053-23867711 FORWARD LENGTH=552
Medicago Medtr3g077200.1 941 80.8 89.1 | PPR containing plant-like protein | HC | chr3:34651569-34656476 | 20130731
Soybean Glyma06g18870.1 940 82.2 89.5  
LJGI gnl|LJGI|FS321847 1076 100.0 100.0 weakly similar to UniRef100_A7PCT9 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0318660.1 length: 553 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 3.7e-05 141-163
171-197
272-298
HMMPfam PF13041 PPR_2 3.6e-12 69-115
371-419
HMMTigr TIGR00756 PPR: 3.4e-05 70-103
272-300
373-407
409-436
ProfileScan PS51375 PPR 5.261 68-102
37-67
169-203
138-168
103-137
270-304
239-269
305-339
371-405
340-370
406-436
442-472
474-508
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9.1e-07 442-527
no_ID  
HMMPanther PTHR24015 FAMILY 2.5e-228 36-549
HMMPanther PTHR24015:SF11 SUBFAMILY 2.5e-228 36-549
Wolf-PSORT
Lj1g3v0318660.1	chlo 8, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0318660.1