| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7J4T5_MEDTR | 780 | 81.0 | 89.7 | (tr|G7J4T5) Histone deacetylase OS=Medicago truncatula GN=MTR_3g077160 PE=3 SV=1 |
| TAIR_pep | AT5G63110.1 | 672 | 71.0 | 80.7 | | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | histone deacetylase 6 | chr5:25315834-25318227 REVERSE LENGTH=471 |
| Medicago | Medtr3g077160.1 | 780 | 81.0 | 89.7 | | histone deacetylase family protein | HC | chr3:34636818-34643051 | 20130731 |
| Soybean | Glyma04g36090.1 | 761 | 79.6 | 89.3 | |
| LJGI | gnl|LJGI|TC59692 | 1388 | 100.0 | 100.0 | similar to UniRef100_A7PCT8 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%) |
| Lj1g3v0318630.1 | length: 465 aa. | |||
| IPR000286 | Histone deacetylase superfamily | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| FPrintScan | PR01270 | HDASUPER | 3.5e-24 | 152-175 184-199 269-279 |
| HMMPanther | PTHR10625 | HISTONE | 4.9e-260 | 19-460 |
| IPR003084 | Histone deacetylase | |||
| Molecular Function | GO:0004407 | histone deacetylase activity | ||
| Biological Process | GO:0016575 | histone deacetylation | ||
| FPrintScan | PR01271 | HISDACETLASE | 6.9e-59 | 41-58 74-92 109-126 130-150 171-187 230-243 247-265 |
| HMMPIR | PIRSF037913 | Histone | 1.5e-278 | 18-465 |
| IPR023801 | Histone deacetylase domain | |||
| Gene3D | G3DSA:3.40.800.20 | no description | 2.5e-119 | 18-397 |
| HMMPfam | PF00850 | Hist_deacetyl | 4.5e-86 | 36-333 |
| no_ID | ||||
| HMMPanther | PTHR10625:SF28 | HISTONE | 4.9e-260 | 19-460 |
| Seg | seg | seg | NA | 407-411 |
| superfamily | SSF52768 | Arginase/deacetylase | 7.4e-129 | 20-389 |
Lj1g3v0318630.1 nucl 7, cyto 4, cysk 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v0318630.1 |