Miyakogusa Predicted Gene

Lj1g3v0318460.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SUJ2_LOTJA 748 95.1 95.1 (tr|I3SUJ2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G48470.1 529 77.3 84.9 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19641810-19644127 FORWARD LENGTH=397

Medicago Medtr1g007490.1 585 86.4 92.0 | hypothetical protein | HC | chr1:395594-399425 | 20130731

Soybean Glyma16g09430.1 544 72.4 79.8

LJGI gnl|LJGI|TC79727 1459 99.1 99.1 similar to UniRef100_A7QYY4 Cluster: Chromosome undetermined scaffold_259, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_259, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v0318460.1 length: 426 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 67-83

Wolf-PSORT

Lj1g3v0318460.1 cyto 8, nucl 4, cyto_pero 4, cyto_E.R. 4, cyto_plas 4

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v0318460.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SUJ2_LOTJA	748	95.1	95.1	(tr\|I3SUJ2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G48470.1	529	77.3	84.9	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr5:19641810-19644127 FORWARD LENGTH=397
Medicago	Medtr1g007490.1	585	86.4	92.0	\| hypothetical protein \| HC \| chr1:395594-399425 \| 20130731
Soybean	Glyma16g09430.1	544	72.4	79.8
LJGI	gnl\|LJGI\|TC79727	1459	99.1	99.1	similar to UniRef100_A7QYY4 Cluster: Chromosome undetermined scaffold_259, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_259, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)

no_ID
Lj1g3v0318460.1				length: 426 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	67-83