Miyakogusa Predicted Gene
- Lj1g3v0318290.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MWC3_SOYBN |
456 |
57.0 |
64.1 |
(tr|I1MWC3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G25820.1 |
293 |
41.2 |
54.6 |
| Symbols: | Exostosin family protein | chr5:8997248-8999574 REVERSE LENGTH=654 |
| Medicago |
Medtr1g006600.1 |
442 |
59.2 |
69.6 |
| exostosin family protein | HC | chr1:51361-54977 | 20130731 |
| Soybean |
Glyma17g27550.1 |
456 |
57.0 |
64.1 |
|
| LJGI |
gnl|LJGI|TC69348 |
1148 |
99.7 |
99.7 |
similar to UniRef100_Q2TLD9 Cluster: IVa2; n=1; Avirulent turkey hemorrhagic enteritis virus|Rep: IVa2 - Avirulent turkey hemorrhagic enteritis virus, partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0318290.2 |
length: 375 aa. |
| IPR004263 |
Exostosin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF03016 |
Exostosin |
2.6e-22 |
257-372 |
| no_ID |
|
| HMMPanther |
PTHR11062 |
EXOSTOSIN |
3.7e-60 |
210-375 |
| HMMPanther |
PTHR11062:SF11 |
EXOSTOSIN |
3.7e-60 |
210-375 |
| Seg |
seg |
seg |
NA |
114-121 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
16 |
38 |
- Wolf-PSORT
Lj1g3v0318290.2 cyto 5, E.R. 3.5, E.R._plas 3, mito 2, plas 1.5, extr 1, vacu 1, chlo_mito 1, cyto_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0318290.2 |
|