Miyakogusa Predicted Gene

Lj1g3v0318050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SKC9_LOTJA 356 50.0 65.2 (tr|I3SKC9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G38590.2 135 31.1 44.7 | Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr5:15452066-15453455 REVERSE LENGTH=410
Medicago Medtr7g098510.1 214 37.9 54.2 | cyclin-like F-box protein | LC | chr7:39437115-39438581 | 20130731
Soybean Glyma08g46590.2 274 42.9 58.9  
LJGI gnl|LJGI|TC66247 228 83.4 83.4  
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0318050.1 length: 392 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 8.6e-09 4-42
HMMSmart SM00256 A 0.00016 8-49
ProfileScan PS50181 FBOX 9.021 2-50
superfamily SSF81383 F-box 1.8e-09 3-73
IPR006566 FBD
HMMPfam PF08387 FBD 1.2e-13 312-361
HMMSmart SM00579 domain 1.2e-05 320-392
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1.3e-15 3-298
HMMPanther PTHR32212 FAMILY 5.9e-45 2-184
superfamily SSF52047 RNI-like 5.6e-11 106-297
Wolf-PSORT
Lj1g3v0318050.1	cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0318050.1