Miyakogusa Predicted Gene

Lj1g3v0307940.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J4A8_MEDTR 811 86.1 92.2 (tr|G7J4A8) Thyroid receptor-interacting protein OS=Medicago truncatula GN=MTR_3g076930 PE=4 SV=1
TAIR_pep AT4G24710.1 681 75.8 87.2 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:12745752-12748995 REVERSE LENGTH=475
Medicago Medtr3g076930.1 811 86.1 92.2 | thyroid receptor-interacting protein | HC | chr3:34541974-34536448 | 20130731
Soybean Glyma06g18700.1 806 85.2 89.7  
LJGI gnl|LJGI|TC58723 1515 100.0 100.0 similar to UniRef100_A7PCR4 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0307940.2 length: 463 aa.
IPR001270 Chaperonin ClpA/B
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
FPrintScan PR00300 CLPPROTEASEA 1.6e-05 201-219
315-329
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.2e-11 197-349
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 2.8e-33 201-346
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 319-338
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.4e-39 150-438
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.5e-37 159-363
HMMPanther PTHR23077 AAA-FAMILY 6.8e-168 48-435
HMMPanther PTHR23077:SF10 THYROID 6.8e-168 48-435
Wolf-PSORT
Lj1g3v0307940.2	cyto 9, nucl 3, chlo 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0307940.2