Miyakogusa Predicted Gene

Lj1g3v0296910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KMT9_SOYBN 770 80.0 86.4 (tr|K7KMT9) Elongation factor Tu OS=Glycine max PE=3 SV=1
TAIR_pep AT4G20360.1 739 78.3 84.8 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase homolog E1B | chr4:10990036-10991466 FORWARD LENGTH=476
Medicago Medtr3g076660.1 757 83.0 87.2 | elongation factor Tu protein | HC | chr3:34457933-34460232 | 20130731
Soybean Glyma05g02670.1 770 80.0 86.4  
LJGI gnl|LJGI|TC75349 1653 100.0 100.0 homologue to UniRef100_Q43467 Cluster: Elongation factor Tu, chloroplast precursor; n=1; Glycine max|Rep: Elongation factor Tu, chloroplast precursor - Glycine max (Soybean), partial (62%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0296910.1 length: 481 aa.
IPR000795 Elongation factor, GTP-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00315 ELONGATNFCT 2.4e-24 86-99
130-138
150-160
166-177
203-212
HMMPfam PF00009 GTP_EFTU 2.3e-59 82-283
PatternScan PS00301 EFACTOR_GTP NA 123-138
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03143 GTP_EFTU_D3 3.5e-34 381-479
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03144 GTP_EFTU_D2 2.5e-17 307-376
IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle
Molecular Function GO:0003746 translation elongation factor activity    
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006414 translational elongation    
HMMTigr TIGR00485 EF-Tu: 5.6e-225 74-481
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 1.9e-15 85-220
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 6.3e-33 287-383
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
superfamily SSF50465 EF-Tu/eEF-1alpha/eIF2-gamma 1e-34 380-481
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.7e-68 79-308
no_ID  
Gene3D G3DSA:2.40.30.10 no description 8e-41 292-380
382-480
Gene3D G3DSA:3.40.50.300 no description 5.1e-66 73-291
HMMPanther PTHR23115 TRANSLATION 7.1e-260 63-481
HMMPanther PTHR23115:SF44 GTPBP2 7.1e-260 63-481
Seg seg seg NA 2-18
98-111
216-230
Wolf-PSORT
Lj1g3v0296910.1	chlo 11, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0296910.1