Miyakogusa Predicted Gene
- Lj1g3v0281610.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KL40_SOYBN |
1304 |
78.8 |
85.1 |
(tr|K7KL40) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G48470.1 |
793 |
51.8 |
65.7 |
| Symbols: EMB2423 | embryo defective 2423 | chr3:17951689-17956754 FORWARD LENGTH=1027 |
| Medicago |
Medtr3g075100.1 |
1222 |
75.5 |
83.8 |
| telomere length regulation protein | HC | chr3:34119274-34109813 | 20130731 |
| Soybean |
Glyma06g18140.4 |
1184 |
70.2 |
76.4 |
|
| LJGI |
gnl|LJGI|TC59189 |
1059 |
100.0 |
100.0 |
similar to UniRef100_A7QZ26 Cluster: Chromosome chr17 scaffold_263, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_263, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0281610.1 |
length: 803 aa. |
| IPR019337 |
Telomere length regulation protein, conserved domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF10193 |
Telomere_reg-2 |
5.5e-14 |
416-526 |
| no_ID |
|
| HMMPanther |
PTHR15830 |
FAMILY |
0 |
47-787 |
| HMMPanther |
PTHR15830:SF5 |
GB |
0 |
47-787 |
| Seg |
seg |
seg |
NA |
369-409 |
- Wolf-PSORT
Lj1g3v0281610.1 chlo 8, nucl 2, extr 2, cyto 1, vacu 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0281610.1 |
|