Miyakogusa Predicted Gene
- Lj1g3v0281600.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SBV8_LOTJA |
572 |
97.9 |
97.9 |
(tr|I3SBV8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G48480.1 |
211 |
45.5 |
64.9 |
| Symbols: | Cysteine proteinases superfamily protein | chr3:17957326-17959062 REVERSE LENGTH=298 |
| Medicago |
Medtr3g075090.1 |
343 |
64.3 |
73.6 |
| Ulp1 protease family, carboxy-terminal domain protein | HC | chr3:34106580-34108532 | 20130731 |
| Soybean |
Glyma04g36810.1 |
337 |
78.7 |
85.5 |
|
| LJGI |
gnl|LJGI|TC61178 |
1701 |
100.0 |
100.0 |
similar to UniRef100_A7QZ27 Cluster: Chromosome chr17 scaffold_263, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_263, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0281600.1 |
length: 284 aa. |
| IPR003653 |
Peptidase C48, SUMO/Sentrin/Ubl1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006508 |
proteolysis |
|
|
| Molecular Function |
GO:0008234 |
cysteine-type peptidase activity |
|
|
| HMMPfam |
PF02902 |
Peptidase_C48 |
3.9e-11 |
130-268 |
| ProfileScan |
PS50600 |
ULP_PROTEASE |
13.830 |
73-246 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.310.130 |
no description |
2.2e-10 |
114-240 |
| HMMPanther |
PTHR12606 |
SENTRIN/SUMO-SPECIFIC |
8.5e-13 |
135-265 |
| HMMPanther |
PTHR12606:SF0 |
SUBFAMILY |
8.5e-13 |
135-265 |
| Seg |
seg |
seg |
NA |
73-78 |
| superfamily |
SSF54001 |
Cysteine |
8e-27 |
67-262 |
- Wolf-PSORT
Lj1g3v0281600.1 cyto 4, nucl 3, mito 3, chlo 1, plas 1, extr 1, golg 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0281600.1 |
|