Miyakogusa Predicted Gene

Lj1g3v0265400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KM48_SOYBN 486 77.2 83.2 (tr|K7KM48) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G21380.1 380 62.8 76.3 | Symbols: | Target of Myb protein 1 | chr1:7485806-7488032 REVERSE LENGTH=506
Medicago Medtr3g088805.1 446 71.6 83.0 | ENTH/VHS/GAT family protein | HC | chr3:40627393-40621194 | 20130731
Soybean Glyma04g42250.1 486 77.2 83.2  
LJGI gnl|LJGI|TC61740 1183 100.0 100.0 similar to UniRef100_A7NVL7 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0265400.1 length: 317 aa.
IPR002014 VHS
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
HMMPfam PF00790 VHS 2.3e-27 10-136
ProfileScan PS50179 VHS 39.714 12-141
IPR004152 GAT
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006886 intracellular protein transport    
HMMPfam PF03127 GAT 1.2e-21 185-270
ProfileScan PS50909 GAT 15.708 179-267
IPR008942 ENTH/VHS
Gene3D G3DSA:1.25.40.90 no description 4.3e-40 6-141
superfamily SSF48464 ENTH/VHS 1.6e-41 4-141
IPR018205 VHS subgroup
HMMSmart SM00288 Domain 1.4e-37 5-137
no_ID  
Gene3D G3DSA:1.20.58.160 no description 3.5e-19 187-268
HMMPanther PTHR13856 VHS 8.5e-152 1-311
HMMPanther PTHR13856:SF3 GB 8.5e-152 1-311
Seg seg seg NA 43-60
superfamily SSF89009 GAT-like 7.1e-27 138-270
Wolf-PSORT
Lj1g3v0265400.1	cyto 6, chlo 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0265400.1