Miyakogusa Predicted Gene

Lj1g3v0177840.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SBZ7_LOTJA 398 95.6 96.1 (tr|I3SBZ7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G09920.1 272 66.2 77.3 | Symbols: | TRAF-type zinc finger-related | chr1:3224863-3226860 REVERSE LENGTH=192
Medicago Medtr5g066840.1 321 73.5 88.2 | TRAF-type zinc finger protein | HC | chr5:28234444-28229391 | 20130731
Soybean Glyma02g38080.1 360 84.7 91.1  
LJGI gnl|LJGI|TC62222 1219 100.0 100.0 similar to UniRef100_A7NUJ0 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (84%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0177840.1 length: 203 aa.
IPR008974 TRAF-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
superfamily SSF49599 TRAF 0.0036 7-59
85-136
no_ID  
HMMPanther PTHR16295 TRAF-TYPE 1.5e-64 1-194
HMMPfam PF02176 zf-TRAF 4.7e-05 59-105
Seg seg seg NA 158-165
Putative transmembrane regions
  From To
TM segments
SOSUI		 175 194
Wolf-PSORT
Lj1g3v0177840.1	cyto 7, nucl 2, golg 2, mito 1, E.R. 1, cysk 1, nucl_plas 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0177840.1