Miyakogusa Predicted Gene

Lj1g3v0162600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MB13_SOYBN 450 75.0 81.5 (tr|I1MB13) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G24470.2 280 59.6 69.8 | Symbols: ZIM, GATA25 | GATA-type zinc finger protein with TIFY domain | chr4:12645785-12647734 FORWARD LENGTH=309
Medicago Medtr5g066510.1 336 60.9 69.7 | GATA transcription factor | HC | chr5:28062542-28067446 | 20130731
Soybean Glyma14g36150.1 450 75.0 81.5  
LJGI gnl|LJGI|TC79512 785 98.6 98.6 similar to UniRef100_Q9LRH6 Cluster: GATA transcription factor 26; n=1; Arabidopsis thaliana|Rep: GATA transcription factor 26 - Arabidopsis thaliana (Mouse-ear cress), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0162600.1 length: 319 aa.
IPR000679 Zinc finger, GATA-type
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00320 GATA 1.8e-14 231-266
HMMSmart SM00401 zinc 1.5e-15 225-278
PatternScan PS00344 GATA_ZN_FINGER_1 NA 231-258
ProfileScan PS50114 GATA_ZN_FINGER_2 11.332 225-284
IPR010399 Tify
HMMPfam PF06200 tify 6.3e-12 98-128
HMMSmart SM00979 no description 1.7e-09 94-129
ProfileScan PS51320 TIFY 13.617 94-129
IPR010402 CCT domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF06203 CCT 2.1e-15 163-206
ProfileScan PS51017 CCT 12.104 163-205
IPR013088 Zinc finger, NHR/GATA-type
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.50.10 no description 3.7e-15 229-272
no_ID  
HMMPanther PTHR10071 TRANSCRIPTION 8.3e-27 140-287
HMMPanther PTHR10071:SF128SUBFAMILY NOT 8.3e-27 140-287
Seg seg seg NA 33-46
superfamily SSF57716 Glucocorticoid 1.3e-15 225-293
Wolf-PSORT
Lj1g3v0162600.1	nucl 8, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0162600.1