Miyakogusa Predicted Gene

Lj1g3v0129860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL Q8S5C2_SOYBN 936 79.5 85.8 (tr|Q8S5C2) 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max GN=Gm4CL-3 PE=2 SV=1
TAIR_pep AT1G65060.1 758 69.3 80.6 | Symbols: 4CL3 | 4-coumarate:CoA ligase 3 | chr1:24167385-24171457 REVERSE LENGTH=561
Medicago Medtr5g007640.1 913 77.4 83.8 | 4-coumarate:CoA ligase-like protein | HC | chr5:1444145-1450200 | 20130731
Soybean Glyma01g44270.1 843 74.9 82.0  
LJGI gnl|LJGI|TC76024 1283 100.0 100.0 similar to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2; n=1; Glycine max|Rep: 4-coumarate--CoA ligase 2 - Glycine max (Soybean), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0129860.1 length: 581 aa.
IPR000873 AMP-dependent synthetase/ligase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00501 AMP-binding 3.3e-109 83-505
IPR020845 AMP-binding, conserved site
PatternScan PS00455 AMP_BINDING NA 224-235
IPR025110 Domain of unknown function DUF4009
HMMPfam PF13193 DUF4009 2.5e-09 545-577
no_ID  
Gene3D G3DSA:2.30.38.10 no description 2.1e-26 396-471
Gene3D G3DSA:3.30.300.30 no description 1.1e-28 477-579
Gene3D G3DSA:3.40.50.980 no description 2.7e-44 60-229
230-383
HMMPanther PTHR24096 FAMILY 2.6e-243 35-580
HMMPanther PTHR24096:SF16 SUBFAMILY 2.6e-243 35-580
Seg seg seg NA 116-127
313-327
superfamily SSF56801 Acetyl-CoA 9.6e-160 16-577
Wolf-PSORT
Lj1g3v0129860.1	E.R. 4, chlo 3, E.R._vacu 3, nucl 2, vacu 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0129860.1