Miyakogusa Predicted Gene
- Lj1g3v0129720.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LMF5_SOYBN |
301 |
78.8 |
85.3 |
(tr|K7LMF5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G31870.1 |
175 |
49.7 |
61.4 |
| Symbols: TEJ | Poly (ADP-ribose) glycohydrolase (PARG) | chr2:13549999-13553756 REVERSE LENGTH=548 |
| Medicago |
Medtr3g029520.1 |
250 |
72.6 |
78.8 |
| poly(ADP-ribose) glycohydrolase | HC | chr3:9287704-9281872 | 20130731 |
| Soybean |
Glyma11g01250.2 |
301 |
78.8 |
85.3 |
|
| LJGI |
gnl|LJGI|AV766181 |
339 |
100.0 |
100.0 |
weakly similar to UniRef100_A7QB18 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0129720.1 |
length: 184 aa. |
| IPR007724 |
Poly(ADP-ribose) glycohydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004649 |
poly(ADP-ribose) glycohydrolase activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPanther |
PTHR12837 |
POLY(ADP-RIBOSE) |
5.1e-40 |
1-184 |
| HMMPfam |
PF05028 |
PARG_cat |
4.4e-28 |
1-127 |
- Wolf-PSORT
Lj1g3v0129720.1 nucl 5.5, cyto_nucl 5.5, cyto 4.5, chlo 1, mito 1, plas 1, cysk 1, chlo_mito 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0129720.1 |
|