Miyakogusa Predicted Gene
- Lj1g3v0116720.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LFX0_SOYBN |
278 |
90.1 |
97.2 |
(tr|I1LFX0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G17900.1 |
233 |
77.6 |
88.8 |
| Symbols: | PLATZ transcription factor family protein | chr4:9946046-9947697 FORWARD LENGTH=227 |
| Medicago |
Medtr5g007230.1 |
272 |
81.2 |
91.6 |
| PLATZ transcription factor family protein | HC | chr5:1251572-1253324 | 20130731 |
| Soybean |
Glyma11g01100.1 |
278 |
90.1 |
97.2 |
|
| LJGI |
gnl|LJGI|TC60337 |
163 |
81.0 |
81.0 |
similar to UniRef100_Q9LPJ4 Cluster: F6N18.8; n=1; Arabidopsis thaliana|Rep: F6N18.8 - Arabidopsis thaliana (Mouse-ear cress), partial (66%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v0116720.1 |
length: 169 aa. |
| IPR006734 |
Protein of unknown function DUF597 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04640 |
PLATZ |
1.4e-40 |
83-154 |
| no_ID |
|
| HMMPanther |
PTHR31065 |
FAMILY |
1.9e-84 |
7-157 |
| HMMPanther |
PTHR31065:SF0 |
SUBFAMILY |
1.9e-84 |
7-157 |
- Wolf-PSORT
Lj1g3v0116720.1 chlo 9, extr 3, nucl 1, cyto 1, cyto_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v0116720.1 |
|